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Bioinformatics Software Engineer (GPU Accelerated)

Prima MenteSan Francisco
On-site Full-time

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Experience Level

Mid to Senior

Qualifications

Preferred Qualifications:Experience in bioinformatics, computational biology, or a related field. Proficiency in software engineering, particularly in developing scalable data processing pipelines. Strong understanding of multi-omics data and methods. Familiarity with GPU/CPU acceleration techniques. Excellent communication and collaboration skills.

About the job

Join Prima Mente: A Leader in Biology AI

At Prima Mente, we are redefining the frontier of biology through artificial intelligence. Our mission is to generate unique datasets, develop versatile biological foundation models, and translate groundbreaking discoveries into impactful research and clinical outcomes. With a commitment to understanding the complexities of the brain, we aim to shield it from neurological diseases while enhancing overall health. Our diverse team of AI researchers, experimentalists, clinicians, and operational experts operates across London, San Francisco, and Dubai.

Role Overview: GPU/CPU-Accelerated Bioinformatics

We are seeking a skilled Bioinformatics Software Engineer to architect and implement scalable production pipelines for processing multi-omics data. The successful candidate will enable rapid transitions from hypothesis to patent-ready solutions in a matter of months.

Key Responsibilities:

  • Design and implement bioinformatics pipelines optimized for GPU/CPU utilization utilizing tools like Flyte and Nextflow, capable of processing over 1,000 samples at scale.

  • Optimize performance and cost efficiency by leveraging GPU/CPU acceleration where it provides the greatest benefit.

  • Collaborate with experimental and machine learning teams to validate computational results and align processing with model requirements.

  • Foster and manage collaborations with academic and industrial research partners.

Growth Expectations

1 Month: You will be deploying your workflows on GPU/CPU-accelerated cloud infrastructure to process multi-omic experiments, while building relationships with AI/ML and wet lab teams to understand their requirements.

3 Months: Your optimized pipelines will be processing thousands of samples with substantial speed enhancements and reduced costs, yielding publication and patent-ready outcomes.

6 Months: Your automated pipelines will support daily AI model training, and you will co-design experiments alongside AI/ML engineers, leading technical execution on external collaborations.

Your Profile

You are passionate about pushing the boundaries of AI and biology. As an engineer rather than an analyst, you thrive on enhancing performance and efficiency while architecting robust systems. You are comfortable making rapid technical decisions and iterate quickly.

Desired Qualifications

  • Experience in bioinformatics, computational biology, or a related field.
  • Proficiency in software engineering, particularly in developing scalable data processing pipelines.
  • Strong understanding of multi-omics data and methods.
  • Familiarity with GPU/CPU acceleration techniques.
  • Excellent communication and collaboration skills.

About Prima Mente

Prima Mente is at the forefront of integrating artificial intelligence with biology, focusing on generating proprietary data and developing innovative biological models to improve research and clinical outcomes. Our mission centers on understanding and enhancing brain health, uniting a talented international team dedicated to transformative discoveries.

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